Center for Quantification of Imaging Data from MAX IV

The QIM Center advances quantitative imaging and large scale 3D image analysis by combining imaging science, AI, and high performance computing. We build open, FAIR research infrastructure that makes complex imaging data findable, accessible, interoperable, and reusable, enabling transparent, reproducible, and impactful science.

Web platform

Online tools for visualization and analysis of imaging data and access to the HPC resources of DTU Compute

Python library

Development of qim3d, an open source library for volumetric image analysis

Method development

Developing new algorithms for quantitative imaging, with focus on 3D microscopy and tomography

Datasets

Volumetric data from imaging experiments, openly available for method development and benchmarking

Scanning support

High-resolution imaging services and support for experimental setup, sample preparation, and imaging strategies

Training

Workshops, courses, and tutorials to support researchers in quantitative imaging methods and tools

The Qim Center is here to help with your research

We offer tools and resources to support imaging data analysis, method development, and reproducible research workflows.

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Web interface

Access from anywhere

Web platform for imaging data

Our online platform allows visualization, analysis, and sharing of imaging datasets with integrated access to HPC resources at DTU Compute. Users can explore, annotate, and export volumetric data easily, while collaborating with colleagues in a fully secure environment. The platform supports multiple file formats and provides interactive visualization tools for 3D microscopy and tomography datasets.

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Python tools

Open-source library

The qim3d Python library

A library for quantitative 3D image analysis, supporting method development and reproducible workflows. It offers modules for segmentation, filtering, and feature extraction of volumetric datasets. Extensive documentation, examples, and tutorials make it easy to integrate into research pipelines and combine with other scientific Python packages for advanced data analysis.

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Custom algorithms

Method development

Algorithm development for research

Develop new quantitative imaging algorithms with a focus on 3D microscopy, tomography, and volumetric data analysis. Our environment allows testing and benchmarking algorithms efficiently, including GPU acceleration and batch processing. Researchers can experiment with new approaches and validate results with standardized datasets, enabling reproducible and high-quality outcomes.

Analysis advice for beamtime data

Guidance on optimal image acquisition, live quality checks during beamtime, and comprehensive data analysis support.

Online platform for data analysis

Access our comprehensive online platform designed for efficient data analysis and processing of your beamtime results.

Software

Easy to use Python libraries (qim3d and CIL) for advanced image processing and analysis.

Training

Comprehensive workshops and written material, including interactive notebooks to help you master the tools and techniques.

Method development

We develop custom methods and solutions for scientific collaborations tailored to your research needs.

Datasets

Access curated datasets for testing and development of your analysis workflows.

The Qim Center is a partnership of

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