The QIM Center advances quantitative imaging and large scale 3D image analysis by combining imaging science, AI, and high performance computing. We build open, FAIR research infrastructure that makes complex imaging data findable, accessible, interoperable, and reusable, enabling transparent, reproducible, and impactful science.
Online tools for visualization and analysis of imaging data and access to the HPC resources of DTU Compute
Developing new algorithms for quantitative imaging, with focus on 3D microscopy and tomography
Volumetric data from imaging experiments, openly available for method development and benchmarking
We offer tools and resources to support imaging data analysis, method development, and reproducible research workflows.
Access from anywhere
Our online platform allows visualization, analysis, and sharing of imaging datasets with integrated access to HPC resources at DTU Compute. Users can explore, annotate, and export volumetric data easily, while collaborating with colleagues in a fully secure environment. The platform supports multiple file formats and provides interactive visualization tools for 3D microscopy and tomography datasets.
Open-source library
A library for quantitative 3D image analysis, supporting method development and reproducible workflows. It offers modules for segmentation, filtering, and feature extraction of volumetric datasets. Extensive documentation, examples, and tutorials make it easy to integrate into research pipelines and combine with other scientific Python packages for advanced data analysis.
Method development
Develop new quantitative imaging algorithms with a focus on 3D microscopy, tomography, and volumetric data analysis. Our environment allows testing and benchmarking algorithms efficiently, including GPU acceleration and batch processing. Researchers can experiment with new approaches and validate results with standardized datasets, enabling reproducible and high-quality outcomes.
Guidance on optimal image acquisition, live quality checks during beamtime, and comprehensive data analysis support.
Access our comprehensive online platform designed for efficient data analysis and processing of your beamtime results.
Easy to use Python libraries (qim3d and CIL) for advanced image processing and analysis.
Comprehensive workshops and written material, including interactive notebooks to help you master the tools and techniques.
We develop custom methods and solutions for scientific collaborations tailored to your research needs.
Access curated datasets for testing and development of your analysis workflows.